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Table 1 List of P. koraiensis transcriptome annotations

From: Transcriptomic analyses of Pinus koraiensis under different cold stresses

Public database

No. of unigene hits

Percentage (%)

Nt

17,684

14.33%

Nr

31,997

25.92%

UniProt

28,163

22.81%

COG

18,909

15.32%

Pfam

22,644

18.34%

eggNOG

16,963

13.74%

GO

18,239

14.78%

KEGG

14,201

11.50%

ALL

38,905

31.52%

  1. Nt Nucleotide database, Nr Nonredundant protein sequence database, UniProt Universal protein database, COG Cluster of Orthologous Groups of proteins, Pfam Protein families database, eggNOG evolutionary genealogy of genes: Nonsupervised Orthologous Groups database, GO Gene Ontology database, KEGG Kyoto Encyclopedia of Genes and Genomes
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BMC Genomics

ISSN: 1471-2164

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