Immune-related KEGG pathway | PGN-treated / PBS-treated | Poly I:C-treated / PBS-treated | |||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Full name | Abbreviation | Head kidney | Liver | TotalDEG | Head kidney | Liver | Total DEG | ||||||||||||
D | TR | TF | W | D | TR | TF | W | Â | D | TR | TF | W | D | TR | TF | W | Â | ||
Antigen processing and presentation | APP | Â | Â | Â | Â | Â | 2 | Â | 2 | 2 | Â | 2 | Â | Â | 1 | Â | Â | Â | 3 |
Complement and coagulation cascades | CCC | Â | 1 | Â | Â | Â | 1 | Â | 1 | 2 | Â | 1 | Â | Â | Â | Â | Â | Â | 1 |
Cytosolic DNA-sensing pathway | CDs | Â | Â | Â | Â | Â | Â | Â | Â | 0 | Â | 1 | Â | Â | Â | Â | Â | Â | 1 |
C-type lectin receptor signaling pathway | CLRs | Â | 1 | Â | Â | Â | Â | 1 | Â | 2 | Â | 1 | Â | Â | Â | 1 | Â | Â | 1 |
Chemokine signaling pathway | Cs | Â | 2 | Â | Â | Â | Â | Â | 1 | 2 | Â | 3 | Â | Â | Â | 1 | Â | 1 | 4 |
Fc gamma R-mediated phagocytosis | FGRP | Â | 2 | 1 | 1 | Â | 1 | Â | Â | 3 | Â | Â | Â | Â | Â | Â | Â | Â | 0 |
Intestinal immune network for IgA production | IINIP | Â | Â | Â | Â | Â | Â | Â | Â | 0 | Â | 1 | Â | Â | Â | Â | Â | Â | 1 |
IL-17 signaling pathway | ILs | Â | 1 | Â | Â | Â | 2 | 1 | 1 | 2 | Â | Â | Â | Â | 1 | Â | Â | 1 | 2 |
Leukocyte trans-endothelial migration | LTM | Â | 2 | Â | 1 | 1 | 3 | Â | 1 | 3 | Â | Â | Â | Â | Â | Â | Â | Â | 0 |
NOD-like receptor signaling pathway | NRs | Â | Â | Â | 1 | Â | Â | Â | Â | 1 | Â | 3 | Â | Â | 1 | 2 | Â | 1 | 4 |
Platelet activation | PA | Â | Â | Â | Â | Â | 1 | Â | Â | 1 | Â | Â | Â | Â | Â | Â | Â | Â | 0 |
RIG-I-like receptor signaling pathway | RRs | Â | Â | Â | Â | Â | Â | Â | Â | 0 | Â | 2 | Â | Â | Â | 1 | Â | 3 | 3 |
Th17 cell differentiation | TCD | Â | Â | Â | Â | Â | Â | Â | Â | 0 | Â | 1 | Â | Â | 1 | 1 | Â | 1 | 3 |
Toll and Imd signaling pathway | TIs | Â | Â | Â | Â | Â | 1 | 1 | 2 | 2 | Â | Â | Â | Â | Â | Â | Â | Â | 0 |
Toll-like receptor signaling pathway | TRs | Â | Â | Â | Â | Â | 2 | Â | 2 | 2 | Â | 2 | Â | Â | Â | 1 | Â | Â | 2 |
Th1 and Th2 cell differentiation | TTCD | Â | Â | Â | Â | Â | Â | Â | Â | 0 | Â | 1 | Â | Â | Â | 1 | Â | Â | 1 |
Total | Â | 9 | 1 | 3 | 1 | 13 | 3 | 10 | 21 | Â | 18 | Â | Â | 4 | 8 | Â | 7 | 15 | |
Average fold change | Â | 3.0 | 3.3 | 6.9 | 10.9 | 15.8 | 5.5 | 2.8 | 9.0 | Â | 12.8 | Â | Â | 7.3 | 7.9 | Â | 4.2 | 16.0 |