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Table 2 Relative gene expression between healthy and FHS proximal femur in RNA-Seq and qPCR analyses in 35-day-old broilers

From: Proximal femoral head transcriptome reveals novel candidate genes related to epiphysiolysis in broiler chickens

 

RNA-Seq

qPCR

Gene

FDR

LogFC

LogFC

Std. error

P-value

LRP1B

3.32E-05

−1.98

−13.51

0.01–0.88

0.012

Col28A1

6.24E-08

−2.59

−3.62

0.07–1.26

0.013

PERP2

1.49E-13

−3.04

−16.10

0.01–0.37

0.001

FAM180A

1.18E-07

−4.46

−2.85

0.08–1.41

0.035

CHST1

1.81E-05

−2.13

−3.70

0.04–1.55

0.046

PLIN1

0.03

2.08

1.82

0.20–18.32

0.427

  1. LRP1B Low density lipoprotein receptor-related protein 1B, Col28A1 Collagen type XXVIII alpha 1 chain, FAM180A Family with sequence similarity 180, member A, PERP2 TP53 apoptosis effector, CHST1 Carbohydrate sulfotransferase 1 and PLIN1 Perilipin-1, FDR (False Discovery Rate), LogFC (Log Fold Change)
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BMC Genomics

ISSN: 1471-2164

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