Table 3 Comparison of characteristics of Core chromosomes and dispensable chromosome of A. brassicae
Characteristic | Core chromosomes | DC contigs (all) |
|---|---|---|
Total length (bp) | 32,140,555 | 1,809,659 |
G + C (%) | 50.85 | 47 |
Number of protein-coding genes | 11,216 | 377 |
Proportion of genes by length (%) | 52.48 | 30.05 |
Number of Transposable element (TE) copies | 1454 | 313 |
Proportion of TEs by length (%) | 5.78 | 20.89 |
Proportion of secreted protein genes (%) | 10.09 | 9.81 |
Proportion of effector genes (%) | 1.69 | 2.39 |