A comprehensive epigenomic analysis of phenotypically distinguishable, genetically identical female and male Daphnia pulex

Kvist, Jouni; Athanàsio, Camila Gonçalves; Pfrender, Michael E.; Brown, James B.; Colbourne, John K.; Mirbahai, Leda

doi:10.1186/s12864-019-6415-5

Table 1 Summary of enriched Reactome pathways across multiple omics datasets comparing male and female Daphnia pulex

From: A comprehensive epigenomic analysis of phenotypically distinguishable, genetically identical female and male Daphnia pulex

ID	Description	DE transcripts	DNA-methylation	H3K27me3	H3K4me3
R-HSA-192823	Viral mRNA Translation	higher in female
R-HSA-927802	Nonsense-Mediated Decay (NMD)	higher in female
R-HSA-5578775	Ion homeostasis	higher in male ^a
R-HSA-72766	Translation	higher in female	higher in female
R-HSA-156827	L13a-mediated translational silencing of Ceruloplasmin expression	higher in female	higher in female
R-HSA-72706	GTP hydrolysis and joining of the 60S ribosomal subunit	higher in female	higher in female
R-HSA-72613	Eukaryotic Translation Initiation	higher in female	higher in female
R-HSA-72737	Cap-dependent Translation Initiation	higher in female	higher in female
R-HSA-2559583	Cellular Senescence		higher in female
R-HSA-983169	Class I MHC mediated antigen processing & presentation		higher in female
R-HSA-189451	Heme biosynthesis				higher in female
R-HSA-8875878	MET promotes cell motility				higher in female
R-HSA-556833	Metabolism of lipids				higher in female
R-HSA-211859	Biological oxidations			higher in female	higher in female
R-HSA-1474244	Extracellular matrix organization	higher in male		higher in female	higher in female
R-HSA-1474228	Degradation of the extracellular matrix	higher in male		higher in female	higher in female
R-HSA-397014	Muscle contraction	higher in male ^a		higher in female
R-HSA-5576891	Cardiac conduction	higher in male ^a		higher in female
R-HSA-6805567	Keratinization	higher in male		higher in female
R-HSA-6809371	Formation of the cornified envelope	higher in male		higher in female
R-HSA-392154	Nitric oxide stimulates guanylate cyclase	higher in male		higher in female
R-HSA-418346	Platelet homeostasis	higher in male		higher in female
R-HSA-112316	Neuronal System	higher in male		higher in female
R-HSA-112314	Neurotransmitter receptors and postsynaptic signal transmission	higher in male		higher in female
R-HSA-112315	Transmission across Chemical Synapses	higher in male		higher in female
R-HSA-382551	Transport of small molecules	higher in male		higher in female
R-HSA-425393	Transport of inorganic cations/anions and amino acids/oligopeptides	higher in male		higher in female
R-HSA-425407	SLC-mediated transmembrane transport	higher in male		higher in female
R-HSA-109582	Hemostasis	higher in male		higher in female
R-HSA-8935690	Digestion			higher in female
R-HSA-372790	Signaling by GPCR			higher in female

^a sex specific expression

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ISSN: 1471-2164

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