Table 1 The median number of reads (per million in the library) that mapped to each pathogen in high and low aggression samples. Pathogen presence and abundance was assessed from RNAseq reads that failed to map to the honey bee genome. Numbers listed after tissue types show the sample sizes for high and low aggression individuals sequenced
From: The transcriptomic signature of low aggression in honey bees resembles a response to infection
| Â | Median reads mapped per million (high/low aggression) | |||
|---|---|---|---|---|
Pathogen | Type | Brain (13/12) | Fat body (11/11) | Midgut (13/12) |
Melissococcus plutonius | Bacteria | 1.41/1.23 | 1.76/1.26 | 2.14/2.67 |
Paenibacillus larvae | Bacteria | 1.00/0.76 | 0.78/1.23 | 1.39/2.06 |
Serratia marcescens | Bacteria | 3.34/2.62 | 6.53/4.62 | 9.07/5.28 |
Spiroplasma apis | Bacteria | 0.61/0.52 | 0.46/0.67 | 0.81/0.90 |
Spiroplasma melliferum | Bacteria | 3.55/3.30 | 1.54/2.00 | 1.36/1.55 |
Ascosphaera apis | Fungus | 1008.72/981.31 | 734.12/731.58 | 595.61/647.32 |
Aspergillus flavus | Fungus | 2428.87/2208.51 | 1918.50/1893.73 | 2986.38/2174.00 |
Aspergillus fumigatus | Fungus | 1217.69/1116.03 | 868.29/926.83 | 1584.81/1117.31 |
Aspergillus niger | Fungus | 2436.75/2261.06 | 1754.62/1822.11 | 3414.74/2413.54 |
Acute bee paralysis virus | Virus | 0/0 | 0/0 | 0/0 |
A. mellifera filamentous virus | Virus | 13.79/20.78 | 0.67/0.93 | 1.69/1.48 |
Black queen cell virus | Virus | 0/0 | 0.12/0 | 0.07/0 |
Chronic bee paralysis virus | Virus | 0/0 | 0/0 | 0/0 |
Deformed wing virus | Virus | 0.03/0.03 | 0.25/0.80 | 0.03/0.14 |
Israel acute paralysis virus | Virus | 0/0 | 0/0 | 0/0 |
Kashmir bee virus | Virus | 0/0 | 0/0 | 0/0 |
Sacbrood virus | Virus | 0/0 | 0/0 | 0/0 |
Slow bee paralysis virus | Virus | 0/0 | 0/0 | 0/0 |