Table 3 List of significant SNPLDBs associated with GCA effects of 9 Quality-related traits
Trait | SNPLBDs | Chromosome | P-value | R2(%) |
|---|---|---|---|---|
BR | 4_BLOCK_17882078_17907416 | 4 | 0.00004 | 54.9 |
S5_12092551 | 5 | 0.00083 | 49.1 | |
MR | 4_BLOCK_17882078_17907416 | 4 | 0.00007 | 53.6 |
S5_12092551 | 5 | 0.00078 | 49.4 | |
HR | 4_BLOCK_17882078_17907416 | 4 | 0.00051 | 52.0 |
S5_12092551 | 5 | 0.00073 | 49.9 | |
8_BLOCK_26862470_27057202 | 8 | 0.00080 | 35.5 | |
PCG | 4_BLOCK_17882078_17907416 | 4 | 0.00093 | 51.1 |
CAS* | 1_BLOCK_937039_1124378 | 1 | 0.00352 | 34.3 |
S2_22375014 | 2 | 0.00277 | 29.4 | |
2_BLOCK_23246549_23402926 | 2 | 0.00978 | 19.6 | |
3_BLOCK_2736967_2935082 | 3 | 0.00679 | 33.6 | |
4_BLOCK_17882078_17907416 | 4 | 0.00135 | 59.0 | |
S5_12092551 | 5 | 0.00226 | 43.1 | |
S8_15013758 | 8 | 0.00232 | 45.6 | |
8_BLOCK_26862470_27057202 | 8 | 0.00483 | 42.9 | |
S9_10804219 | 9 | 0.00431 | 47.8 | |
S9_21092077 | 9 | 0.00520 | 26.4 | |
11_BLOCK_16710912_16770852 | 11 | 0.00319 | 60.9 | |
12_BLOCK_3214955_3413848 | 12 | 0.00702 | 23.2 | |
CD | 4_BLOCK_17882078_17907416 | 4 | 0.00075 | 52.2 |
GT | 4_BLOCK_17882078_17907416 | 4 | 0.00009 | 50.3 |
GC | 4_BLOCK_17882078_17907416 | 4 | 0.00009 | 50.3 |
S5_12092551 | 5 | 0.00057 | 41.3 | |
AC* | S2_22375014 | 2 | 0.00343 | 47.8 |
2_BLOCK_23246549_23402926 | 2 | 0.00902 | 20.0 | |
3_BLOCK_2736967_2935082 | 3 | 0.00909 | 51.0 | |
3_BLOCK_26597888_26785589 | 3 | 0.00879 | 23.6 | |
4_BLOCK_17882078_17907416 | 4 | 0.00281 | 54.3 | |
S5_12092551 | 5 | 0.00235 | 42.9 | |
S8_15013758 | 8 | 0.00124 | 49.5 | |
8_BLOCK_26862470_27057202 | 8 | 0.00707 | 49.8 | |
S9_10804219 | 9 | 0.00731 | 43.7 | |
9_BLOCK_20278565_20464993 | 9 | 0.00954 | 19.8 | |
S9_21092077 | 9 | 0.00533 | 26.2 | |
11_BLOCK_16710912_16770852 | 11 | 0.00164 | 63.5 | |
11_BLOCK_23565814_23565855 | 11 | 0.00973 | 20.9 | |
11_BLOCK_24442254_24636131 | 11 | 0.00759 | 31.9 | |
12_BLOCK_3214955_3413848 | 12 | 0.00791 | 22.6 |