Table 2 Novel lncRNA contigs with strongest evidence across multiple correlates
From: Pan-tissue transcriptome analysis of long noncoding RNAs in the American beaver Castor canadensis
Contig | Measure | max (RPKM) | ||||
|---|---|---|---|---|---|---|
Length (nt) | MFE (kcal/mol) | Coverage | BLASTn Alignment Length (%) | Intronic | ||
Ccan_OSU1_lncRNA_contig41254.1 | 367 | −96.8 | 26.71 | 100.00 | no | 7.8 |
Ccan_OSU1_lncRNA_contig46102.1 | 334 | − 103.57 | 8.42 | 100.00 | no | 7.6 |
Ccan_OSU1_lncRNA_contig46174.1 | 333 | − 126.5 | 16.66 | 100.00 | no | 6.5 |
Ccan_OSU1_lncRNA_contig43610.1 | 350 | −140.8 | 10.21 | 83.71 | no | 30.1 |
Ccan_OSU1_lncRNA_contig44966.1 | 341 | − 149.8 | 11.81 | 63.93 | no | 48.6 |
Ccan_OSU1_lncRNA_contig45799.1 | 336 | − 77 | 16.06 | 100.00 | no | 8.0 |
Ccan_OSU1_lncRNA_contig59927.1 | 267 | −103.7 | 13.66 | 100.75 | no | 13.0 |
Ccan_OSU1_lncRNA_contig62060.1 | 260 | −50.7 | 36.25 | 69.23 | yes | 22.8 |