Table 3 Number of F. varia ncRNAs compared with the known ncRNAs from other insect genomes
RNA families | F. varia | A. mellifera | B. impatiens | N. vitripennis | S. invicta | A. cephalotes | D. mel | A. gambiae | B. mori |
|---|---|---|---|---|---|---|---|---|---|
v1.1 | 4.5 | BIMP_2.0 | 2.1 | Si_gnG | 1.0 | BDGP6 | AgamP4 | ASM15162v1 | |
tRNA | 180 | 193 | 216 | 215 | 390 | 290 | 314 | 463 | 427 |
snRNA | 53 | 24 | 56 | 41 | 24 | 20 | 31 | 38 | 488 |
rRNA | 21 | 56 | 93 | 47 | 65 | 32 | 147 | 78 | 110 |
miRNA | 103 | 256 | 65 | 106 | 207 | 46 | 542 | 162 | 74 |
sno/scaRNA | 9 | 5 | 9 | 8 | 7 | 9 | 288 | 12 | 8 |
lncRNA | 1580 | 1 | 1 | 1 | 2776 | ||||
Total | 1946 | 539 | 448 | 426 | 1379 | 449 | 4098 | 767 | 1122 |