Complete chloroplast genome sequence of Barleria prionitis, comparative chloroplast genomics and phylogenetic relationships among Acanthoideae

Table 4 Codon – anticodon recognition patterns and codon usage of the J. flava chloroplast genome

Codon	Amino Acid	Count	RSCU	tRNA	Codon	Amino Acid	Count	RSCU	tRNA
UUU	Phe	1278	1.18	trnF-GAA	UAU	Tyr	964	1.43	trnY-GUA
UUC	Phe	882	0.82		UAC	Tyr	384	0.57
UUA	Leu	704	1.29	trnL-UAA	UAA	Stop	556	1.02
UUG	Leu	717	1.31	trnL-CAA	UAG	Stop	484	0.89
CUU	Leu	660	1.21	trnL-UAG	CAU	His	492	1.29	trnH-GUG
CUC	Leu	423	0.77		CAC	His	268	0.71
CUA	Leu	477	0.87		CAA	Gln	685	1.38	trnQ-UUG
CUG	Leu	302	0.55		CAG	Gln	309	0.62
AUU	Ile	1149	1.26	trnI-GAU	AAU	Asn	1046	1.39	trnG-GUU
AUC	Ile	788	0.86		AAC	Asn	463	0.61
AUA	Ile	801	0.88	trnI-CAU	AAA	Lys	1253	1.29	trnK-UUU
AUG	Met	706	1	trnM-CAU	AAG	Lys	686	0.71
GUU	Val	606	1.5	trnV-GAC	GAU	Asp	721	1.45	trnD-GUC
GUC	Val	258	0.64		GAC	Asp	273	0.55
GUG	Val	292	0.72		GAA	Glu	943	1.38	trnE-UUC
GUA	Val	462	1.14	trnV-UAC	GAG	Glu	420	0.62
UCU	Ser	704	1.45	trnS-GGA	UGU	Cys	443	1.19	trnC-GCA
UCC	Ser	447	0.92		UGC	Cys	301	0.81
UCG	Ser	389	0.8		UGA	Stop	595	1.09
UCA	Ser	614	1.26	trnS-UGA	UGG	Trp	622	1	trnW-CCA
CCU	Pro	416	1.24	trnP-UGG	CGU	Arg	266	0.69	trnR-ACG
CCC	Pro	283	0.85		CGC	Arg	148	0.39	trnR-UCU
CCA	Pro	393	1.17		CGA	Arg	436	1.14
CCG	Pro	247	0.74		CGG	Arg	294	0.77
ACU	Thr	428	1.18		AGA	Arg	761	1.98
ACC	Thr	311	0.86		AGG	Arg	399	1.04
ACG	Thr	242	0.67	trnT-GGU	AGU	Ser	457	0.94	trnS-GCU
ACA	Thr	471	1.3	trnT-UGU	AGC	Ser	302	0.62
GCU	Ala	349	1.34	trnA-UGC	GGU	Gly	520	1.05	trnG-GCC
GCC	Ala	206	0.79		GGC	Gly	290	0.59
GCA	Ala	301	1.16		GGA	Gly	670	1.36
GCG	Ala	186	0.71		GGG	Gly	493	1	trnG-UCC

ISSN: 1471-2164