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Table 4 Codon – anticodon recognition patterns and codon usage of the J. flava chloroplast genome

From: Complete chloroplast genome sequence of Barleria prionitis, comparative chloroplast genomics and phylogenetic relationships among Acanthoideae

Codon Amino Acid Count RSCU tRNA Codon Amino Acid Count RSCU tRNA
UUU Phe 1278 1.18 trnF-GAA UAU Tyr 964 1.43 trnY-GUA
UUC Phe 882 0.82   UAC Tyr 384 0.57  
UUA Leu 704 1.29 trnL-UAA UAA Stop 556 1.02  
UUG Leu 717 1.31 trnL-CAA UAG Stop 484 0.89  
CUU Leu 660 1.21 trnL-UAG CAU His 492 1.29 trnH-GUG
CUC Leu 423 0.77   CAC His 268 0.71  
CUA Leu 477 0.87   CAA Gln 685 1.38 trnQ-UUG
CUG Leu 302 0.55   CAG Gln 309 0.62  
AUU Ile 1149 1.26 trnI-GAU AAU Asn 1046 1.39 trnG-GUU
AUC Ile 788 0.86   AAC Asn 463 0.61  
AUA Ile 801 0.88 trnI-CAU AAA Lys 1253 1.29 trnK-UUU
AUG Met 706 1 trnM-CAU AAG Lys 686 0.71  
GUU Val 606 1.5 trnV-GAC GAU Asp 721 1.45 trnD-GUC
GUC Val 258 0.64   GAC Asp 273 0.55  
GUG Val 292 0.72   GAA Glu 943 1.38 trnE-UUC
GUA Val 462 1.14 trnV-UAC GAG Glu 420 0.62  
UCU Ser 704 1.45 trnS-GGA UGU Cys 443 1.19 trnC-GCA
UCC Ser 447 0.92   UGC Cys 301 0.81  
UCG Ser 389 0.8   UGA Stop 595 1.09  
UCA Ser 614 1.26 trnS-UGA UGG Trp 622 1 trnW-CCA
CCU Pro 416 1.24 trnP-UGG CGU Arg 266 0.69 trnR-ACG
CCC Pro 283 0.85   CGC Arg 148 0.39 trnR-UCU
CCA Pro 393 1.17   CGA Arg 436 1.14  
CCG Pro 247 0.74   CGG Arg 294 0.77  
ACU Thr 428 1.18   AGA Arg 761 1.98  
ACC Thr 311 0.86   AGG Arg 399 1.04  
ACG Thr 242 0.67 trnT-GGU AGU Ser 457 0.94 trnS-GCU
ACA Thr 471 1.3 trnT-UGU AGC Ser 302 0.62  
GCU Ala 349 1.34 trnA-UGC GGU Gly 520 1.05 trnG-GCC
GCC Ala 206 0.79   GGC Gly 290 0.59  
GCA Ala 301 1.16   GGA Gly 670 1.36  
GCG Ala 186 0.71   GGG Gly 493 1 trnG-UCC