Structural region | Alignment length (bp) | Number of variable sites | Nucleotide polymorphism | ||||
---|---|---|---|---|---|---|---|
Polymorphic | Singleton | PIa | PI sites (%) | πb | Hc | ||
Whole DNA | 153,229 | 2172 | 1062 | 1110 | 0.72 | 0.0024 | 30 |
LSC | 84,443 | 1501 | 742 | 759 | 0.90 | 0.0029 | 30 |
SSC | 18,737 | 523 | 266 | 257 | 1.37 | 0.0047 | 26 |
IRd | 50,049 | 148 | 54 | 94 | 0.19 | 0.0006 | 23 |