Fig. 3

Functional assignment of Dickeya solani pangenome fractions. Comparative functional analysis was performed by mapping of the core (blue), accessory (green) and unique (red) genes to the following COG categories: C - energy production and conversion, D - cell cycle control, cell division, chromosome partitioning, E - amino acid transport and metabolism, F - nucleotide transport and metabolism, G - carbohydrate transport and metabolism, H - coenzyme transport and metabolism, I - lipid transport and metabolism, J - translation, ribosomal structure and biogenesis, K - transcription, L - replication, recombination and repair, M - cell wall/membrane/envelope biogenesis, N - cell motility, O - post-translational modification, protein turnover and chaperones, P - inorganic ion transport and metabolism, Q - secondary metabolites biosynthesis, transport and catabolism, R - general function prediction only, S - function unknown, T - signal transduction mechanisms, U - intracellular trafficking, secretion and vesicular transport and V - defence mechanisms, with the use of BPGA v. 1.3 Pan Genome Functional Analysis module [75]. Overrepresented core, accessory and unique COGs within the attributed functional groups are marked with an asterisk (hypergeometric test; p < 0.05)