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Table 3 Pangenome statistics for 22 Dickeya solani genomes

From: Comparative genomics and pangenome-oriented studies reveal high homogeneity of the agronomically relevant enterobacterial plant pathogen Dickeya solani

D. solani genome

Pangenome

Core

Genes

Accessory

Genes

Unique

genes

Absent

Genes

IFB0167

3726

256

0

0

IFB0212

3726

254

0

0

IFB0231

3726

256

0

0

IFB0311

3726

250

0

1

IFB0417

3726

256

17

5

IFB0421

3726

255

4

1

IFB0487

3726

237

20

27

IFB0695

3726

232

5

19

IFB0099

3726

255

0

0

IFB0158

3726

261

1

0

IFB0221

3726

261

0

0

IFB0223

3726

249

0

3

IPO 2222

3726

271

2

0

GBBC 2040

3726

219

10

24

MK10

3726

260

5

2

MK16

3726

260

0

0

D s0432–1

3726

262

1

0

PPO 9019

3726

258

2

0

PPO 9134

3726

258

1

0

RNS 05.1.2A

3726

113

286

107

RNS 07.7.3B

3726

254

0

0

RNS 08.23.3.1A

3726

255

2

0

  1. The presented data were calculated with the use of BPGA software [75]. The genomes depicted in bold have been de novo sequenced and assembled in the frames of this research. The included reference genomes have been annotated with the use of Prokka [68] prior to conducting the pangenome analysis
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BMC Genomics

ISSN: 1471-2164

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