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Table 1 Classification of gene clusters (ID1–54) corresponding to the dendrogram in Fig. 4

From: Divergence of metabolites in three phylogenetically close Monascus species (M. pilosus, M. ruber, and M. purpureus) based on secondary metabolite biosynthetic gene clusters

ID

Type of GCs

Pi

Ru

Pu

Secondary metabolic pathways detected in DNA sequence homology

ATP-binding cassettes

Identity level

1

t1pks

1

4

–

Narbonolide/10-deoxymethynolide (pikAI – AIV), Phthiocerol/phenolphthionocerol (ppsA - E)

–

**

2

t1pks

2

–

–

Phthiocerol/phenolphthionocerol (ppsA - E)

–

–

3

t1pks

18

19

7

Azaphilone*, Lovastatin (LOVB, LOVF), Narbonolide/10-deoxymethynolide (pikAI – AIV), Phthiocerol/phenolphthionocerol (ppsA - E)

–

–

4

t1pks

22

–

–

–

–

*

5

t1pks

23

48

17

Lovastatin (LOVB, LOVF), Narbonolide/10-deoxymethynolide (pikAI – AIV), Phthiocerol/phenolphthionocerol (ppsA - E)

–

*

6

t1pks

19

43

–

Monacolin K*, Compactin, Lovastatin (LOVA, LOVB)

–

*

7

t1pks

–

–

8

Citrinin*, Narbonolide/10-deoxymethynolide (pikAI–AIV), Phthiocerol/phenolphthionocerol (ppsA-C, E)

–

*

8

t1pks

9

–

10

Byssochlamic acid*, Narbonolide/10-deoxymethynolide (pikAI–AIV), Phthiocerol/phenolphthionocerol (ppsA-C, E)

–

*

9

nrps

4

10

19

Neosartoricin*, Fengycin (fenA–E), Surfacin (srfAA-AC)

–

**

10

nrps

13

30

20

Brevianamide F (FTMA)

ABCB

**

11

nrps

7

2

–

Fengycin (fenA-E), Surfacin (srfAA-AC)

ABCC

**

12

nrps

11

23

2

Fengycin (fenA-D)

ABCC

**

13

nrps

5

22

12

Fengycin (fenA-D)

–

*

14

nrps

24

21

–

Fengycin (ppsA-D), surfacing (srfAA-AC)

ABCB

*

15

nrps

3

41

–

Fengycin (fenA–D)

–

*

16

nrps

–

–

9

Fengycin (fenB, D), Ferricrocin (SIDC, SIDD)

–

–

17

t1pks-nrps

8

40

5

NG-391*, Fengycin (fenA–E), Surfacin (surAA-AC)

ABCC

**

18

t1pks-nrps

14

27

14

Gramicidin (grsA-B), Fengycin (fenA–E), Surfacin (surAA-AC)

–

*

19

t1pks-nrps

20

13

3

Lovastatin (LOVB, LOVF), Fengycin (fenA-E), Surfactin (srfAA-AC)

ABCB

*

ID

Type of GCs

Pi

Ru

Pu

Secondary metabolic pathways detected in DNA sequence homology

ATP-binding cassettes

Identity level

20

terpene

12

24

11

Fernesyl-diphosphate (FDFT1)

–

**

21

terpene

17

12

13

Lupeol (LUP1,2,4,5), Arabidiol (PEN1), Tinucalladienol (PEN3), seco-amyrin (PEN6)

–

*

22

terpene

–

–

15

–

–

–

23

others

15

42

18

Fengycin (fenA, C, E), Surfacin (srfAA-AB)

ABCF

**

24

others

6

32

6

Kinesin (KIDFC1–3)

–

*

25

others

10

5

16

Abscisic aldehyde (AAO1–4), Fengycin (fenA, B, E), Surfactin (srfAA, AB)

ABCB

*

26

others

16

33

4

Histidinol (hisD, IE)

–

*

27

others

21

28

1

–

–

*

28

cf-putative

–

1

–

–

–

–

29

cf-putative

–

3

–

Palmitin (ZDHHC)

–

–

30

cf-putative

–

6

–

Palmitin (ZDHHC4)

–

–

31

cf-putative

–

7

–

–

–

–

32

cf-putative

–

8

–

–

–

–

33

cf-putative

–

9

–

–

–

–

34

cf-putative

–

11

–

–

–

–

35

cf-putative

–

14

–

Serine, Threonine (PP1C, 2C, 4C, 6C)

–

–

36

cf-putative

–

15

–

–

ABCG2

–

37

cf-putative

–

16

–

–

–

–

38

cf-putative

–

17

–

–

–

–

39

cf-putative

–

18

–

Mannan (ANPI, MNN9)

–

–

40

cf-putative

–

20

–

–

–

–

41

cf-putative

–

25

–

–

–

–

42

cf-putative

–

29

–

–

–

–

43

cf-putative

–

31

–

–

–

–

44

cf-putative

–

34

–

–

–

–

45

cf-putative

–

36

–

–

–

–

ID

Type of GCs

Pi

Ru

Pu

Secondary metabolic pathways detected in DNA sequence homology

ATP-binding cassettes

Identity level

46

cf-putative

–

37

–

–

–

–

47

cf-putative

–

38

–

–

–

–

48

cf-putative

–

39

–

Lovastatin (LOVB-G), Phthiocerol/Phenolphthiocerol (ppsA,C)

–

–

49

cf-putative

–

44

–

–

–

–

50

cf-putative

–

45

–

–

–

–

51

cf-putative

–

46

–

–

–

–

52

cf-putative

–

47

–

–

–

–

53

cf_fatty_acid

–

26

–

–

–

–

54

cf_fatty_acid

–

35

–

Fatty acid (FAS1,2)

–

–

  1. The type of GCs was determined using antiSMASH software. Pi, Ru, and Pu represent the cluster ID in Fig. 4. Identical gene organization is denoted by red numbers. The secondary metabolic pathways represent the secondary metabolite information based on DNA sequence homology. Type of ATP-binding cassettes detected in individual groups is represented as ATP-binding cassettes. Gene-cluster groups with both identical gene organization and high DNA sequence similarity are denoted by ‘**’ and groups with only high DNA sequence similarity are denoted by ‘*’. Two-letter abbreviations use used for the Venn diagrams: Pi, M. pilosus NBRC 4520; Ru, M. ruber NBRC 4483; Pu, M. purpureus NBRC 4478