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Table 4 Average RF rates (± standard error) of different methods on the Carnivores dataset. The best RF rates for various model conditions are shown in boldface

From: Machine learning based imputation techniques for estimating phylogenetic trees from incomplete distance matrices

#Taxa

#Entries

#Missing

Average RF Rate

  

Entries

DAMBE

LASSO

MF

AE

  

5

0.29 ±0.06

0.14 ±0.06

0.37 ±0.1

0.23 ±0.07

  

10

0.6 ±0.03

0.23 ±0.07

0.71 ±0.06

0.23 ±0.07

10

45

15

0.63 ±0.07

0.26 ±0.02

0.83 ±0.09

0.57 ±0.04

  

20

0.77 ±0.03

0.4 ±0.06

0.94 ±0.07

0.63 ±0.05

  

25

N/A

N/A

0.94 ±0.05

0.74 ±0.05

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BMC Genomics

ISSN: 1471-2164

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