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Table 6 Average RF (± standard error) of different methods on the mtDNAPri3F84SE dataset. The best RF rates for various model conditions are shown in boldface

From: Machine learning based imputation techniques for estimating phylogenetic trees from incomplete distance matrices

#Taxa

#Entries

#Missing

Average RF Rate

  

Entries

DAMBE

LASSO

MF

AE

  

2

0.05 ±0.05

0.1 ±0.04

0.4 ±0.15

0.15 ±0.09

  

5

0.2 ±0.08

0.2 ±0.08

0.55 ±0.08

0.5 ±0.1

7

21

7

0.4 ±0.11

0.3 ±0.13

0.75 ±0.07

0.8 ±0.19

  

10

0.65 ±0.17

0.5 ±0.16

0.8 ±0.04

0.7 ±0.04

  

12

N/A

N/A

0.9 ±0.05

0.85 ±0.05

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BMC Genomics

ISSN: 1471-2164

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