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Fig. 2 | BMC Genomics

Fig. 2

From: Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium

Fig. 2

Phylogenetic tree of Fusarium PKS genes retrieved by OrthoFinder analysis of Fusarium genome sequence data and based on their relatively close relationships to the fumonisin PKS gene (FUM1). The phylogenetic tree was inferred by maximum likelihood analysis of an alignment of predicted amino acid sequences of coding regions of 347 PKS gene homologs. All clades shown (indicated by triangles) are within the larger, previously described Reducing PKS Clade III, and the PKS clade numbers correspond to previously described clade numbers [41]. The colored triangles indicate clades consisting of homologs located in putative SAM clusters, and black triangles indicate clades consisting of homologs that are not located in SAM clusters. For clades of SAM PKS genes, numbers in parentheses indicate number of homologs per clade. Numbers near branches are bootstrap values based on 1000 pseudoreplicates

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BMC Genomics

ISSN: 1471-2164

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