Table 3 Numbers of differentially expressed genes on core (numbers 1–13) and dispensable (14–21) chromosomes in the six comparisons of RNA sequences from Zymoseptoria tritici cultures exposed to different wavelengths of light or kept in the dark
From: The wheat pathogen Zymoseptoria tritici senses and responds to different wavelengths of light
Chromosome | White versus dark | Blue versus dark | Red versus dark | White versus blue | White versus red | Blue versus red | Total genes |
|---|---|---|---|---|---|---|---|
1 | 548 | 433 | 368 | 6 | 100 | 14 | 2319 |
2 | 327 | 272 | 233 | 12 | 46 | 2 | 1393 |
3 | 286 | 235 | 194 | 6 | 67 | 15 | 1307 |
4 | 244 | 196 | 181 | 7 | 48 | 7 | 998 |
5 | 239 | 196 | 178 | 6 | 43 | 6 | 987 |
6 | 202 | 175 | 144 | 8 | 41 | 5 | 829 |
7 | 189 | 155 | 129 | 9 | 48 | 8 | 822 |
8 | 183 | 156 | 130 | 3 | 26 | 5 | 848 |
9 | 155 | 136 | 110 | 5 | 33 | 2 | 714 |
10 | 148 | 127 | 110 | 2 | 22 | 5 | 616 |
11 | 146 | 129 | 114 | 4 | 24 | 3 | 605 |
12 | 107 | 87 | 77 | 1 | 14 | 3 | 521 |
13 | 95 | 76 | 54 | 3 | 21 | 6 | 423 |
14 | 16 | 13 | 7 | 0 | 3 | 0 | 159 |
15 | 12 | 8 | 9 | 6 | 15 | 1 | 142 |
16 | 12 | 16 | 21 | 2 | 5 | 0 | 164 |
17 | 6 | 3 | 11 | 7 | 15 | 0 | 131 |
18 | 30 | 30 | 25 | 0 | 0 | 0 | 130 |
19 | 13 | 12 | 13 | 1 | 7 | 0 | 139 |
20 | 7 | 3 | 6 | 2 | 9 | 0 | 129 |
21 | 5 | 4 | 9 | 0 | 3 | 0 | 114 |
Core 1–13 | 2869 | 2373 | 2022 | 72 | 533 | 81 | 12,382 |
Dispensable 14–21 | 101 | 89 | 101 | 18 | 57 | 1 | 1108 |
Total | 2970 | 2462 | 2123 | 90 | 590 | 82 | 13,490 |
Percent dispensable | 3.4 | 3.6 | 4.8 | 20.0 | 9.7 | 1.2 | 8.2 |