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Fig. 5 | BMC Genomics

Fig. 5

From: A comparison of BeadChip and WGS genotyping outputs using partial validation by sanger sequencing

Fig. 5

BeadChip genotyping quality metrics with highlighted Sanger-validated variants. Theta, R, GC Score values for sample_002 are shown; histograms show the corresponding distributions of plotted metrics in a 1-dimensional space; concordant and discordant variants are marked in blue and orange, respectively; genotypes which are not consistent with Sanger sequencing in both WGS and BeadChip results are marked with a star, matches between Sanger and BeadChip are marked with triangles, matches between Sanger and WGS are marked with circles, variants which were not successfully genotyped by Sanger are marked with crosses

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