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Fig. 5 | BMC Genomics

Fig. 5

From: Transcriptome analysis provides insights into the non-methylated lignin synthesis in Paphiopedilum armeniacum seed

Fig. 5

Lignin biosynthesis pathway and monolignol biosynthesis related gene expression in P. armeniacum. PAL, phenylalanine ammonia lyase; C4H, cinnamate 4-hydroxylase; 4CL, 4-coumarate:CoA ligase; CCR, cinnamoyl-CoA reductase; CAD, cinnamyl alcohol dehydrogenase; C3H, 4-coumarate 3-hydroxylase; HCT, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyl transferase; CSE, caffeoyl shikimate esterase; CCoAOMT, caffeoyl-CoA 3-O-methyltransferase; COMT, caffeic acid O-methyltransferase; F5H, ferulate-5-hydroxylase; CAD, cinnamyl alcohol dehydrogenase; POX/LAC, peroxidases/laccase. Gene expression was scaled using the Z-score of FPKM (mean value of three biological replicates) in the heatmap. For each heatmap, the key is located at right side with FPKM values increasing from green to red

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BMC Genomics

ISSN: 1471-2164

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