Table 2 Clustering performance based on synthetic data (J=100)
From: Bayesian gamma-negative binomial modeling of single-cell RNA sequencing data
Zero-Inflation | 40% | 60% | 80% |
|---|---|---|---|
hGNB | 0.3645 ±0.011 | 0.1698 ±0.007 | 0.0905 ±0.009 |
PCA | 0.2929 ±0.012 | 0.1265 ±0.012 | 0.0631 ±0.013 |
ZIFA | 0.2642 ±0.019 | 0.1314 ±0.011 | 0.0728 ±0.010 |
ZINB | 0.3501 ±0.022 | 0.1641 ±0.011 | 0.0911 ±0.010 |
Monocle | 0.2453 ±0.015 | 0.1155 ±0.017 | 0.0613 ±0.010 |
scVI | 0.3122 ±0.029 | 0.1476 ±0.023 | 0.0593 ±0.005 |