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Table 1 Genome properties and quality metrics of the strains sequenced in this study

From: Comparative genomic analysis of Flavobacteriaceae: insights into carbohydrate metabolism, gliding motility and secondary metabolite biosynthesis

 

Aa_C5

Aa_D4

Aa_F7

Da_B9

DN50

DN105

DN112

Size (Mbp)

3.7

3.7

4.2

4.3

5.3

4.8

4.7

Contigs

45

13

43

19

38

83

19

%GC

37

37

41

45

39

36

31

N50 (Mbp)

0.8

0.7

0.6

0.6

0.3

0.1

1.3

Per base coverage (x)

1331

357

298

248

77

207

261

Completeness (%)

98.7

98.7

99.3

99.7

99.7

99.7

99.3

Contamination

0.1

0.1

0.2

0.7

1.8

0.6

1.0

Total gene count

3317

3306

3776

4079

4738

4331

4069

CDS genes (%)

98.7

98.7

98.8

98.7

98.7

98.8

98.0

Number of 16S rRNA genes

1

1

2

1

3

1

1

Number of tRNA genes

36

36

37

45

50

40

63

Genes in Pfams (%)

80.9

80.9

77.8

74.8

70.2

73.2

77.8

Isolation source

Aplysina aerophoba

Aplysina aerophoba

Aplysina aerophoba

Dysidea avara

Aplysina aerophoba

Aplysina aerophoba

Aplysina aerophoba