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Table 1 Genome properties and quality metrics of the strains sequenced in this study

From: Comparative genomic analysis of Flavobacteriaceae: insights into carbohydrate metabolism, gliding motility and secondary metabolite biosynthesis

  Aa_C5 Aa_D4 Aa_F7 Da_B9 DN50 DN105 DN112
Size (Mbp) 3.7 3.7 4.2 4.3 5.3 4.8 4.7
Contigs 45 13 43 19 38 83 19
%GC 37 37 41 45 39 36 31
N50 (Mbp) 0.8 0.7 0.6 0.6 0.3 0.1 1.3
Per base coverage (x) 1331 357 298 248 77 207 261
Completeness (%) 98.7 98.7 99.3 99.7 99.7 99.7 99.3
Contamination 0.1 0.1 0.2 0.7 1.8 0.6 1.0
Total gene count 3317 3306 3776 4079 4738 4331 4069
CDS genes (%) 98.7 98.7 98.8 98.7 98.7 98.8 98.0
Number of 16S rRNA genes 1 1 2 1 3 1 1
Number of tRNA genes 36 36 37 45 50 40 63
Genes in Pfams (%) 80.9 80.9 77.8 74.8 70.2 73.2 77.8
Isolation source Aplysina aerophoba Aplysina aerophoba Aplysina aerophoba Dysidea avara Aplysina aerophoba Aplysina aerophoba Aplysina aerophoba