Table 1 Top 10 motif hits for switching genes from MSigDB search. 1340 genes were compared to gene sets in C3 TFT (transcription factor targets) gene sets [16]
Gene Set Name | # Genes in Overlap | FDR q-value |
|---|---|---|
GGGCGGR_SP1_Q6 | 273 | 1.13×10−64 |
GGGAGGRR_MAZ_Q6 | 231 | 4.79×10−61 |
CAGGTG_E12_Q6 | 221 | 2.17×10−48 |
CTTTGT_LEF1_Q2 | 185 | 3.19×10−43 |
TGGAAA_NFAT_Q4_01 | 170 | 5.06×10−37 |
CAGCTG_AP4_Q5 | 148 | 6.78×10−36 |
TTGTTT_FOXO4_01 | 172 | 1.09×10−33 |
AACTTT_UNKNOWN | 162 | 5.16×10−33 |
GGGTGGRR_PAX4_03 | 129 | 2.36×10−32 |
CTTTAAR_UNKNOWN | 94 | 2.39×10−22 |