Table 1 Ptr isolate sequence, assembly and annotation statistics
| Â | M4a | DW5 |
|---|---|---|
Isolate information | ||
 Race | 1 | 5 |
 Effectors | AC | B |
 Collection site | Western Australia | North Dakota |
 Collection year | 2009 | 1998 |
Sequencing | ||
 Sequencing Platform | PacBio RSII | PacBio Sequel |
 Number of reads | 594,877 | 1,306,274 |
 Total sequence (Mbp) | 3500 | 14,225 |
 Sequencing coverage | 75 | 355.62 |
Error correction | ||
 Number of reads | 56,338 | 302,147 |
 Error corrected sequence (Mbp) | 758 | 3085 |
 Genome coverage | 19 | 77.13 |
Assembly statistics | ||
 NCBI accession | NQIK00000000 | MUXC00000000 |
 Number of contigs | 50 | 60 |
 Number of scaffolds* | 41* | NA |
 Total length contigs/scaffolds* (Mb) | 40.92* | 40.87 |
 N50 (Mb) | 3.65 | 3.13 |
 L50 | 4 | 5 |
 Mean size (kb) | 998 | 681 |
 GC % | 50.73 | 50.21 |
 Repeat % | 7.96 | 8.33 |
Gene predictions | M4b | Â |
 Gene number | 15,443 | 14,276 |
 Total CDS (Mb) | 20.7 | 17.9 |
 Average size (kb) | 1.3 | 1.2 |
Predicted effectors | ||
 Number of predicted effectors | 445 | 401 |
 Total length (aa) | 61,737 | 60,150 |
 Mean gene size (aa) | 138 | 150 |
 Median gene size (aa) | 117 | 123 |