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Fig. 3 | BMC Genomics

Fig. 3

From: Benchmarking hybrid assembly approaches for genomic analyses of bacterial pathogens using Illumina and Oxford Nanopore sequencing

Fig. 3

Core-genome phylogenetic tree of the hybrid assemblies of Escherichia coli O157:H7 Sakai with simulated Illumina short reads and mediocre- or low-quality Oxford Nanopore long reads using MaSuRCA, SPAdes, and Unicycler in addition to the reference genome (in red) compared to 30 Shiga-toxin producing E. coli (STEC) strains. The scale bar indicates the genetic distance

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BMC Genomics

ISSN: 1471-2164

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