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Fig. 1 | BMC Genomics

Fig. 1

From: Intra-species variation within Lactobacillus rhamnosus correlates to beneficial or harmful outcomes: lessons from the oral cavity

Fig. 1

L. rhamnosus phylogenetic tree. GToTree was used to generate alignments and a phylogenetic tree based on HMM profiles. For comparative genomics analysis Genbank, fasta and gff format files were downloaded using the NCBI web link https://www.ncbi.nlm.nih.gov/genome/doc/ftpfaq/#downloadservice (Table S1). Blue: Genome sequences of L. rhamnosus and Lactobacillus spp. from the exclusive clinical clade of 5 strains: L. rhamnosus LRHMDP2, LRHMDP3, 699_LRHA, 708_LRHA and Lactobacillus spp. HMSC077C11. Red: L. rhamnosus BPL5 and BPL15 form a clade distant from the clinical clade of 5 strains

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BMC Genomics

ISSN: 1471-2164

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