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Fig. 2 | BMC Genomics

Fig. 2

From: Intra-species variation within Lactobacillus rhamnosus correlates to beneficial or harmful outcomes: lessons from the oral cavity

Fig. 2

Genomic organisation of wzb-wzd synteny EPS cluster of L. rhamnosus LRHMDP2, LRHMDP3, L. rhamnosus 699_LRHA, 708_LRHA, Lactobacillus spp. HMSC077C11 and L. rhamnosus BPL5/BPL15. Proteinortho, a standalone tool, was used to determine conservation of orthologous genes across selected L. rhamnosus isolates for a specific EPS gene cluster. Genomic organization of EPS cluster genes was ascertained using EasyFig, a python application for creating linear comparison figures of multiple genomic loci, within the ‘wzb-wzd’ synteny EPS cluster locus. L. rhamnosus LRHMDP2, LRHMDP3, BPL5, BPL15 and Lactobacillus spp. HMSC077C11 on continuous contig (a), L. rhamnosus LRHMDP2, LRHMDP3 and 699_LRHA split on to 2 contigs (b). L. rhamnosus LRHMDP2, LRHMDP3 and 708_LRHA (split on to 3 contigs) (c)

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BMC Genomics

ISSN: 1471-2164

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