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Table 2 SNP markers associated with test survival (TS) and time of death (TD) traits estimated on pacu against Aeromonas hydrophila infection, using GBLUP and wGBLUP methods

From: Development of a SNP linkage map and genome-wide association study for resistance to Aeromonas hydrophila in pacu (Piaractus mesopotamicus)

QTL

GWAS method

AGV (%)

Genes related to the immune system

TS

TD

1

wGBLUP

2.59

2.99

anp32b, srebf2

2

wGBLUP

4.05

1.89

acbd5, rala, zkscan1

3

wGBLUP

1.17

1.31

lrrc3b, myo16

4a

wGBLUP

3.52

1.32

camlg, tcf7, nlrc3

4b

GBLUP

1.59

tnfsf13b

wGBLUP

1.65

5.34

5a

wGBLUP

1.19

1.40

axl, emilin1

5b

GBLUP

1.28

kalrn, il4i1

wGBLUP

2.98

6

wGBLUP

3.96

lgr6

7a

GBLUP

1.13

1.07

cyp27c1, fundc1

wGBLUP

1.58

7b

wGBLUP

3.45

3.63

inhbb, srcin1, tcaf1

9

GBLUP

1.03

tbk1, trim16, zmat3

wGBLUP

1.67

1.62

10a

wGBLUP

1.56

1.57

mtmr10

10b

wGBLUP

1.42

11

GBLUP

1.10

1.05

rps6ka5, ccr3, cyp2k1

wGBLUP

1.19

12

wGBLUP

1.14

13a

wGBLUP

1.18

2.74

itpk1, mark4

13b

wGBLUP

1.95

myo18a, caln1

17

wGBLUP

1.08

1.34

tiam1

18

GBLUP

1.30

lyz2, il12rb2

wGBLUP

1.16

15.65

19

wGBLUP

1.58

unc5b, znf3

23

wGBLUP

2.06

slk

27

wGBLUP

1.22