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Table 4 Analysis of the top 10 GPI-anchored CWPs with signal peptidesa

From: Genome sequencing, assembly, and annotation of the self-flocculating microalga Scenedesmus obliquus AS-6-11

Protein name

GPI probability (%)

pI

Mw (KDa)

SMART analysis

Subcellular localization sites

Sco00011036

99.82

6.75

7.13

TMR

vacu: 8, chlo: 2, plas: 2, extr: 1, golg: 1

Sco00023226

99.73

5.38

30.84

TMR

vacu: 8, plas: 4, extr: 2

Sco00002357

99.65

6.36

9.68

TMR

extr: 7, E.R.: 3.5, E.R._plas: 3, mito: 2, plas: 1.5

Sco00003994

99.51

4.95

21.28

–

extr: 12, mito: 1, E.R.: 1

Sco00022819

99.47

8.59

29.73

TMR

extr: 11, mito: 2, vacu: 1

Sco00000470

99.41

9.58

14.83

TMR

vacu: 7, plas: 3, extr: 2, E.R.: 1, golg: 1

Sco00000669

99.33

8.48

6.10

–

extr: 12, mito: 1, plas: 1

Sco00004618

99.02

7.51

15.28

TMR

extr: 9, vacu: 3, chlo: 2

Sco00003952

98.73

7.51

78.84

TMR

plas: 11, vacu: 2, E.R.: 1

Sco00008125

98.71

5.22

8.87

–

plas: 11, extr: 11, vacu: 2, nucl: 1, cyto: 1, E.R.: 1

  1. achlo chloroplast, cyto cytoplasmic, E.R. endoplasmic reticulum, extr secreted, golg golgi apparatus, mito mitochondrial matrix, plas membrane protein, TMR Transmembrane region, vacu vacuolar. ‘-’ represented no information available
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BMC Genomics

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