Table 2 Genes differentially expressed in dedifferentiated tissues compared to differentiated tissues in Eucalyptus
From: Transcriptome analysis identifies genes involved in the somatic embryogenesis of Eucalyptus
Gene family | E. camaldulensis | E. grandis x urophylla | Shared | E. camaldulensis only |
|---|---|---|---|---|
Ethylene related | 27/22a | 16/37 | 15/17 | 12/5 |
Auxin | 25/16 | 18/18 | 15/14 | 10/2 |
Ribosomal protein | 15/86 | 41/8 | 12/6 | 3/80 |
Zinc finger protein | 35/44 | 38/38 | 28/23 | 7/21 |
Heat shock protein | 23/13 | 29/6 | 21/5 | 2/8 |
Histone | 27/12 | 33/11 | 24/6 | 3/6 |
TF | 155/117 | 128/143 | 95/79 | 60/38 |
ABA | 3/5 | 5/4 | 3/2 | 0/3 |
AGP | 5/3 | 4/6 | 2/3 | 3/0 |
Embryogenesis | 8/3 | 5/3 | 3/2 | 5/1 |
Cell wall | 154/120 | 131/120 | 86/66 | 68/54 |