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Fig. 4 | BMC Genomics

Fig. 4

From: Bioinformatic analysis and functional predictions of selected regeneration-associated transcripts expressed by zebrafish microglia

Fig. 4

Homology model of P10 chemokine interleukin-8-like domain. Lymphotactin (1j8i.1.A in the rcsb protein database) is the template used for the homology modelling of P10. The homology model starts from P10 residue N°24 (GLU, Glutamic acid) and ends with the residue N° 102 (SER, Serine). The NMR spectroscopy was used to determine the experimental structure of 1j8i.1.A [62]. The blue color show regions of the model where P10 was well modeled and orange regions where P10 was poorly modeled. The chemokine interleukin-8-like domain of the model starts with P10 amino acid at position N°27(HIS, Histidine) and ends with amino acid at position N°86 ((LEU, Leucine). This region includes both well-modeled (blue) and poorly-modeled (orange) sections

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