Fig. 8
From: Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling
mRNA capture variation across peripheral blood mononuclear cells (PBMCs). a Single-cell data generated with the 10x 3′ v3 and 10x 5′ v1 chemistries were projected onto an annotated PBMC CITE-Seq reference dataset. b Violin plots of log normalized expression of common immune-cell markers. c nGenes and d nUMIs detected for each cell class from each method. CTL-cytotoxic, TCM – T central memory, TEM – T effector memory, Treg – T regulatory cells, dnT – double negative T, gdT – gamma delta T, MAIT - Mucosal associated invariant T, pDC - Plasmacytoid dendritic cell, ASDC - AXL+ dendritic cell, cDC – classical dendritic cell, MC – monocyte, Eryth-Erythrocyte, ILC - Innate lymphoid cell, HSPC - Hematopoietic stem and progenitor cell