Comparative mitogenome analyses uncover mitogenome features and phylogenetic implications of the subfamily Cobitinae

Table 2 Annotation of the C. macrostigma mitogenome

Feature	Position	Nucleotide size (bp)	Start codon	Stop codon	Amino acid	Anti-codon	Intergenic nucleotide^a	Strand^b
tRNA^Phe (S)	1–69	69				GAA	0	H
12S rRNA	70–1021	952					0	H
tRNA^Val (V)	1022–1093	72				TAC	0	H
16S rRNA	1094–2768	1675					0	H
tRNA^Leu(UUR) (L1)	2769–2843	75				TAA	1	H
nd1	2845–3819	975	ATG	TAA	324		6	H
tRNA^Ile (I)	3826–3897	72				GAT	-2	H
tRNA^Gln (Q)	3896–3966	71				TTG	1	L
tRNA^Met (M)	3968–4036	69				CAT	0	H
nd2	4037–5081	1045	ATG	T	348		0	H
tRNA^Trp (W)	5082–5151	70				TCA	1	H
tRNA^Ala (A)	5153–5221	69				TGC	1	L
tRNA^Asn (N)	5223–5295	73				GTT	0	L
L-strand replication origin (O_L)	5296–5325	30					0
tRNA^Cys (C)	5326–5391	66				GCA	0	L
tRNA^Tyr (Y)	5392–5460	69				GTA	1	L
cox1	5462–7012	1551	GTG	TAA	516		1	H
tRNA^Ser(UCN) (S2)	7014–7084	71				TGA	2	L
tRNA^Asp (D)	7087–7158	72				GTC	13	H
cox2	7172–7906	735	ATG	TAA	244		26	H
tRNA^Lys (K)	7933–8008	76				TTT	1	H
atp8	8010–8177	168	ATG	TAA	55		−10	H
atp6	8168–8851	684	ATG	TAA	227		−1	H
cox3	8851–9634	784	ATG	T	261		0	H
tRNA^Gly (G)	9635–9706	72				TCC	0	H
nd3	9707–10,055	349	ATG	T	116		0	H
tRNA^Arg (R)	10,056–10,125	70				TCG	0	H
nd4l	10,126–10,422	297	ATG	TAA	98		−7	H
nd4	10,416–11,797	1382	ATG	TA	460		0	H
tRNA^His (H)	11,798–11,866	69				GTG	0	H
tRNA^Ser(AGY) (S1)	11,867–11,934	68				GCT	1	H
tRNA^Leu(CUN) (L2)	11,936–12,008	73				TAG	0	H
nd5	12,009–13,847	1839	ATG	TAG	612		−4	H
nd6	13,844–14,365	522	ATG	TAA	173		0	L
tRNA^Glu (E)	14,366–14,434	69				TTC	6	L
cytb	14,441–15,581	1141	ATG	T	380		0	H
tRNA^Thr (T)	15,582–15,653	72				TGT	−2	H
tRNA^Pro (P)	15,652–15,721	70				TGG	−2	L
Control region (CR)	15,720–16,636	917

ISSN: 1471-2164