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Table 7 Up-regulated genes with known functions in Vd-X, Vd-Z, Vd-H and Vd-W at 6 h or 12 h

From: Transcriptomic analysis of gene expression of Verticillium dahliae upon treatment of the cotton root exudates

Code

Gene ID

Enzyme name

FPKM value

CK

VdX6

VdX12

VdZ6

VdZ12

VdH6

VdH12

VdW6

VdW12

1

VDAG_01200

Multidrug resistance protein

2.574203

3.176818

8.456135

10.58305

4.440765

8.923448

3.200822

3.971342

5.1336

2

VDAG_02063

L-amino-acid oxidase

0.635877

0.5626

1.614603

1.483211

1.348462

1.682819

1.940567

0.826722

2.25874

3

VDAG_02178

Quinate permease

0.058306

0.627263

0.485426

0.606461

1.024123

0.628178

0.873477

0.321581

0.459276

4

VDAG_02520

Response regulator receiver domain-containing protein

11.43198

30.89575

40.29134

13.93595

49.39211

43.4858

14.60711

33.75135

13.91367

5

VDAG_02528

RNA-dependent RNA polymerase

2.550404

6.828783

5.918211

5.244344

7.547659

8.333781

6.355329

6.082573

5.05485

6

VDAG_02981

Methyltransferase domain-containing protein

1.048951

2.022277

2.645048

3.118421

2.771815

4.705878

1.726638

1.905085

4.283733

7

VDAG_03099

Glucan 1,3-beta-glucosidase

0.304888

1.159252

1.177232

1.289926

1.029788

1.617254

1.194427

0.743662

0.829034

8

VDAG_03536

YetA

14.37066

33.60962

24.66688

23.71565

30.52655

24.97965

27.41519

21.24693

27.49016

9

VDAG_03975

C6 zinc finger domain-containing protein

15.00863

29.21758

18.81392

18.84766

31.24542

29.8705

26.07178

21.38755

27.99133

10

VDAG_04598

Glycogenin-1

37.06267

68.97229

48.17265

45.46692

77.10089

69.11893

70.61616

54.23442

63.30747

11

VDAG_05008

Peptidase M20 domain-containing protein 2

0.951232

3.683467

2.85524

2.704868

2.485291

2.347381

2.428679

2.431284

2.273593

12

VDAG_05649

BNR/Asp-box repeat domain-containing protein

1.485317

5.698776

3.41501

3.134149

4.311877

5.442967

4.981001

3.789991

2.962473

13

VDAG_05829

Heat shock protein HSP98

2851.294

8213.736

5839.808

8385.88

7207.387

5492.246

3748.727

7855.11

6926.32

14

VDAG_05831

Phenylalanine ammonia-lyase

5.327448

10.4713

14.76473

18.7942

11.65773

24.15234

5.273917

8.005835

11.82046

15

VDAG_05832

FAD binding domain-containing protein

0.97946

5.375452

9.59148

13.22928

11.4021

29.036

1.738944

5.22337

11.88564

16

VDAG_05836

Para-hydroxybenzoate-polyprenyltransferase

0.16421

0.23375

2.238529

1.346959

3.046437

4.084031

0.142631

1.331249

1.254863

17

VDAG_06240

Phytanoyl-CoA dioxygenase

3.271209

4.96076

16.97013

14.02229

11.25868

20.8611

5.329389

5.988937

9.619971

18

VDAG_06907

E3 ubiquitin-protein ligase

19.52358

41.99442

38.90181

40.99749

42.84902

65.42277

43.04462

32.43004

37.12453

19

VDAG_07183

Carboxypeptidase A

0.590637

4.817832

2.275429

1.521062

2.023665

1.406215

0.779928

1.725569

0.451422

20

VDAG_07270

Mycocerosic acid synthase

0.563822

1.191726

1.288242

1.182283

0.764326

1.502613

1.056965

0.88995

0.998817

21

VDAG_07344

Cutinase

0

0.757969

0.60793

0.962218

1.396963

2.694802

0.561964

0.477185

1.374841

22

VDAG_07854

Maltose O-acetyltransferase

2.196192

3.946491

6.820049

7.200627

3.16318

6.916005

5.754764

2.764381

4.99843

23

VDAG_08529

Anaphase-promoting complex subunit 8

13.30899

23.23852

34.1324

40.32327

24.52103

40.96512

25.52018

20.15623

27.3556

24

VDAG_08712

Cyanide hydratase

0.511059

3.463236

24.39127

3.558516

18.23755

11.04813

5.794128

4.979065

1.917549

25

VDAG_09806

FAD binding domain-containing protein

0.850458

1.504143

1.687359

1.407464

1.919441

1.757326

2.404167

1.50623

1.979163

26

VDAG_10401

Integral membrane protein

1.080071

3.072609

4.37851

3.103026

2.956657

4.107363

3.177632

2.617038

2.934669

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