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Table 7 Up-regulated genes with known functions in Vd-X, Vd-Z, Vd-H and Vd-W at 6 h or 12 h

From: Transcriptomic analysis of gene expression of Verticillium dahliae upon treatment of the cotton root exudates

CodeGene IDEnzyme nameFPKM value
CKVdX6VdX12VdZ6VdZ12VdH6VdH12VdW6VdW12
1VDAG_01200Multidrug resistance protein2.5742033.1768188.45613510.583054.4407658.9234483.2008223.9713425.1336
2VDAG_02063L-amino-acid oxidase0.6358770.56261.6146031.4832111.3484621.6828191.9405670.8267222.25874
3VDAG_02178Quinate permease0.0583060.6272630.4854260.6064611.0241230.6281780.8734770.3215810.459276
4VDAG_02520Response regulator receiver domain-containing protein11.4319830.8957540.2913413.9359549.3921143.485814.6071133.7513513.91367
5VDAG_02528RNA-dependent RNA polymerase2.5504046.8287835.9182115.2443447.5476598.3337816.3553296.0825735.05485
6VDAG_02981Methyltransferase domain-containing protein1.0489512.0222772.6450483.1184212.7718154.7058781.7266381.9050854.283733
7VDAG_03099Glucan 1,3-beta-glucosidase0.3048881.1592521.1772321.2899261.0297881.6172541.1944270.7436620.829034
8VDAG_03536YetA14.3706633.6096224.6668823.7156530.5265524.9796527.4151921.2469327.49016
9VDAG_03975C6 zinc finger domain-containing protein15.0086329.2175818.8139218.8476631.2454229.870526.0717821.3875527.99133
10VDAG_04598Glycogenin-137.0626768.9722948.1726545.4669277.1008969.1189370.6161654.2344263.30747
11VDAG_05008Peptidase M20 domain-containing protein 20.9512323.6834672.855242.7048682.4852912.3473812.4286792.4312842.273593
12VDAG_05649BNR/Asp-box repeat domain-containing protein1.4853175.6987763.415013.1341494.3118775.4429674.9810013.7899912.962473
13VDAG_05829Heat shock protein HSP982851.2948213.7365839.8088385.887207.3875492.2463748.7277855.116926.32
14VDAG_05831Phenylalanine ammonia-lyase5.32744810.471314.7647318.794211.6577324.152345.2739178.00583511.82046
15VDAG_05832FAD binding domain-containing protein0.979465.3754529.5914813.2292811.402129.0361.7389445.2233711.88564
16VDAG_05836Para-hydroxybenzoate-polyprenyltransferase0.164210.233752.2385291.3469593.0464374.0840310.1426311.3312491.254863
17VDAG_06240Phytanoyl-CoA dioxygenase3.2712094.9607616.9701314.0222911.2586820.86115.3293895.9889379.619971
18VDAG_06907E3 ubiquitin-protein ligase19.5235841.9944238.9018140.9974942.8490265.4227743.0446232.4300437.12453
19VDAG_07183Carboxypeptidase A0.5906374.8178322.2754291.5210622.0236651.4062150.7799281.7255690.451422
20VDAG_07270Mycocerosic acid synthase0.5638221.1917261.2882421.1822830.7643261.5026131.0569650.889950.998817
21VDAG_07344Cutinase00.7579690.607930.9622181.3969632.6948020.5619640.4771851.374841
22VDAG_07854Maltose O-acetyltransferase2.1961923.9464916.8200497.2006273.163186.9160055.7547642.7643814.99843
23VDAG_08529Anaphase-promoting complex subunit 813.3089923.2385234.132440.3232724.5210340.9651225.5201820.1562327.3556
24VDAG_08712Cyanide hydratase0.5110593.46323624.391273.55851618.2375511.048135.7941284.9790651.917549
25VDAG_09806FAD binding domain-containing protein0.8504581.5041431.6873591.4074641.9194411.7573262.4041671.506231.979163
26VDAG_10401Integral membrane protein1.0800713.0726094.378513.1030262.9566574.1073633.1776322.6170382.934669