Table 1 List of materials for sequencing
Crop Type | Entry | Accession | Pop ID | PI # / Source | NCBI BioSample | Total Reads | Gb | Coverage (X) | Year Released | Descriptiona |
|---|---|---|---|---|---|---|---|---|---|---|
Sugar Beet | 1 | EL10 | EL10 | 689015 | SAMN08040263 | 447,211,041 | 111.8 | 149.1 | 2018 | Reference genome assembly short-read set |
2 | C869 | C869 | 628754 | SAMN12674956 | 549,262,696 | 68.7 | 90.6 | 2002 | Parent population of EL10 | |
3 | EL50/2 | EL50 | 598073 | SAMN12842344 | 487,259,716 | 60.9 | 80.4 | 1994 | Cercospora Resistance | |
4 | EL51 | EL51 | 598074 | SAMN12842345 | 456,623,952 | 57.1 | 75.3 | 2000 | Rhizoctonia Resistance | |
5 | East Lansing Breeding Population | GP10 | - | SAMN12842346 | 492,970,286 | 61.6 | 81.3 | Pending | OP Recurrent Selection Population | |
6 | East Lansing Breeding Population | GP9 | - | SAMN12842348 | 847,319,042 | 105.9 | 139.7 | Pending | OP Recurrent Selection Population | |
7 | L19 | L19 | 590690 | SAMN12842351 | 767,383,878 | 76.7 | 101.2 | 1978 | High Sucrose (>20%) | |
8 | SP6322 | SP7322 | 615525 | SAMN12842349 | 549,262,696 | 68.7 | 90.6 | 1973 | Adaptation to Eastern US | |
9 | SR102 | SR102 | 675153 | SAMN12842347 | 462,483,116 | 57.8 | 76.3 | 2016 | Smooth Root/Low Tare | |
10 | SR98/2 | SR98/2 | 655951 | SAMN12842350 | 482,270,894 | 60.3 | 79.5 | 2011 | Rhizoctonia Resistance | |
Table Beet | 11 | Bulls Blood Table Beet | BBTB | Chriseeds | SAMN12842352 | 519,832,300 | 65.0 | 85.7 | 1700 | Historic ornamental and vegetable variety |
12 | Crosby Egyptian Table Beet | Crosby | Chriseeds | SAMN12842353 | 466,455,846 | 58.3 | 76.9 | 1869 | US variety with Egyptian background | |
13 | Detroit Dark Red Table Beet | DDTB | Chriseeds | SAMN12842357 | 473,659,992 | 59.2 | 78.1 | 1892 | US variety | |
14 | Ruby Queen Table Beet | RQ | Chriseeds | SAMN12842354 | 500,356,022 | 62.5 | 82.5 | 1950 | Current production | |
15 | Touch Stone Gold Table Beet | TG | Chriseeds | SAMN12842355 | 396,335,036 | 49.5 | 65.4 | Unknown | Golden Root | |
17 | Wisconsin Breeding Line | W357B | Univ. WI | SAMN12842358 | 538,981,844 | 53.9 | 71.1 | 1982 | Self-fertile O-type | |
16 | Albino Table Beet | WT | Chriseeds | SAMN12842356 | 503,139,454 | 62.9 | 83.0 | Unknown | White root | |
Fodder Beet | 18 | Mammoth Red Fodder | MAM | Burpee | SAMN12842363 | 400,297,680 | 40.0 | 52.8 | 1800 | Heirloom fodder beet variety |
19 | Wintergold Fodder | WGF | Local stock | SAMN12842364 | 545,378,784 | 54.5 | 71.9 | Unknown | Winter beet with gold skin pigment | |
Chard | 20 | Fordhook Giant | FGSC | Chriseeds | SAMN12842359 | 484,646,866 | 60.6 | 79.9 | 1934 | Green chard |
21 | Lucullus Chard | LUC | Chriseeds | SAMN12842361 | 617,051,314 | 61.7 | 81.4 | Pre-1700s | Historic green chard variety | |
22 | Rhubarb Swiss Chard | RHU | Chriseeds | SAMN12842362 | 538,577,146 | 53.9 | 71.1 | 1857 | Red chard | |
23 | Vulcan Swiss Chard | Vulcan | Chriseeds | SAMN12842360 | 547,992,902 | 68.5 | 90.4 | Unknown | Red chard |