Table 1 The comparative statistics of the chloroplast genome assembly of S.polyrhiza 7498 generated from long reads of PacBio and short reads of SOLiD platform

Number of selected reads^a

239,086

19,906,092

Total nucleotides (selected data) (bp)^a

2,579,414,638

995,304,600

Mean read length (selected data) (bp)^a

10,789

50

Number of scaffolds

1

3

Number of genome gaps

0

52

Total genome coverage

7837

5474

Genome Size (bp)

168,956

168,788

LSC (bp)

91,210

91,222

SSC (bp)

14,058

14,056

IR (bp)

31,844

31,755

GC content (%)

35.68

35.69

GenBank ID

MN419335

JN160603