Fig. 3
From: Comparative chloroplast genomics of the genus Taxodium
The tandem repeats of ycf1 gene in conifers. The phylogenetic tree was constructed based on the sequence alignments of ycf1 genes using Mafft. The right side of the phylogenetic tree showed the position of tandem repeats on the ycf1 gene. The length of the horizontal line was drawn according to the length of multiple sequence alignment, which included the length of gaps. Therefore, the position of repeats in different species can be mapped to each other. The rightmost column listed the actual length of ycf1 genes (excluding gaps)