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Table 1 List of genes involved in Phototransduction pathway of Pde6c mutant zebrafish (p-value = 0.0014000; FDR = 0.0039000)

From: RNA-Seq reveals differential expression profiles and functional annotation of genes involved in retinal degeneration in Pde6c mutant Danio rerio

Ref mRNA

Gene Symbol

Gene Name

logFC

p-value

NM_001007160

pde6a

phosphodiesterase 6A, cGMP-specific, rod, alpha

−12.88482348

9.29E-08

NM_001017711

grk1b

G protein-coupled receptor kinase 1 b

−15.21450566

1.36E-13

NM_001030248

rcvrna

recoverin a

−14.7635283

1.67E-12

NM_001031841

grk7a

G protein-coupled receptor kinase 7a

−14.51580863

8.55E-12

NM_001034181

grk1a

G protein-coupled receptor kinase 1 a

−5.203467963

2.80E-06

NM_001327800

rgs9a

regulator of G protein signaling 9a

−5.215468297

1.45E-08

NM_131084

rho

rhodopsin

−6.296723464

8.77E-13

NM_131868

gnat1

guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1

−7.218093348

2.15E-13

NM_131869

gnat2

guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2

−4.074631105

4.60E-08

NM_199570

calm3b

calmodulin 3b (phosphorylase kinase, delta)

−14.42999547

1.49E-11

NM_199996

calm2a

calmodulin 2a (phosphorylase kinase, delta)

−13.04988312

3.41E-08

NM_213481

gnb1b

guanine nucleotide binding protein (G protein), beta polypeptide 1b

−13.12286971

2.17E-08