Table 2 A list of the most promising candidate genes for Pb tolerance in rapeseed
QTLs | Candidate Genes | Locations | Distance to associated SNPs (kb) | A. thaliana orthologs | Annotations |
|---|---|---|---|---|---|
Pb-A09 | BnaA09g14510D | strand - (chrA09:8337575..8338088) | 20.69 | AT1G59700 | AtGSTU16, Glutathione S-transferase |
BnaA09g14520D | strand - (chrA09:8345181..8345671) | 28.3 | AT1G59700 | AtGSTU16, Glutathione S-transferase | |
BnaA09g14540D | strand - (chrA09:8372673..8373944) | 55.79 | AT1G59670 | AtGSTU15, Glutathione S-transferase. | |
Pb-C03–1 | BnaC03g02630D | strand - (chrC03:1250190..1259000) | 17.204 | AT3G11910 | AtUBP13,ubiquitin-specific protease 13 |
BnaC03g02690D | strand + (chrC03:1282603..1284862) | 43.066 | AT5G06700 | AtTBR, Protein trichome birefringence | |
Pb-C03–2 | BnaC03g68440D | strand - (chrC03:58120344..58122336) | 43.22 | AT1G50110 | AtBCAT6, Branched-chain-amino-acid aminotransferase 6, |
BnaC03g68450D | strand - (chrC03:58123734..58126490) | 47.38 | AT1G50090 | AtBCAT7, Putative branched-chain-amino-acid aminotransferase 7. | |
BnaC03g68460D | strand - (chrC03:58136020..58137057) | 57.94 | – | – | |
Pb-C04 | BnaC04g16200D | strand + (chrC04:14207994..14209539) | 179.58 | AT2G28090 | AtHIPP01, Heavy metal-associated isoprenylated plant protein 1 |