Skip to main content

Table 1 FPKM intervals to assess unigene expression level for four P. italicum RNA-seq libraries

From: Transcriptome analysis of fungicide-responsive gene expression profiles in two Penicillium italicum strains with different response to the sterol demethylation inhibitor (DMI) fungicide prochloraz

FPKM interval

Pi-R-I

Pi-R-NI

Pi-S-I

Pi-S-NI

0~1

1930 (18.78%)

1662 (16.18%)

1746 (16.99%)

1653 (16.09%)

1~3

810 (7.88%)

725 (7.06%)

703 (6.84%)

648 (6.31%)

3~15

2296 (22.35%)

1995 (19.42%)

1874 (18.24%)

1866 (18.16%)

15~60

2831 (27.55%)

3251 (31.64%)

3314 (32.25%)

3404 (33.13%)

60~

2408 (23.44%)

2642 (25.71%)

2638 (25.67%)

2704 (26.32%)

  1. 0~1, 1~3, 3~15, 15~60, and 60~ indicate different FPKM intervals. The Table lists unigene number in each FPKM interval for each P. italicum RNA-seq library, and for each RNA-seq library, the percentage in bracket indicates unigene numbers in specific FPKM interval to the total unigene number
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us