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Fig. 3 | BMC Genomics

Fig. 3

From: Biased visibility in Hi-C datasets marks dynamically regulated condensed and decondensed chromatin states genome-wide

Fig. 3

Low visibility of polytene bands and inactive X-chromosome. a Distribution of raw and corrected read counts in band and inter-band regions of polytene chromosome and the corresponding regions in diploid chromosome. P-values were calculated using two-tailed Mann-Whitney U tests. b Illustrative examples of read counts and contact maps in band and inter-band regions (chr2R: 17.5-18 Mb) of polytene and diploid chromosome. Band regions are marked as horizontal line below the line plots. c Scatter plots of raw and corrected DNase-Hi-C read counts of active vs. inactive x-chromosomes in Brain and Patski cells. d Illustrative examples of corrected read counts and contact maps of chrX: 36–44 Mb region in active and inactive X-chromosome

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BMC Genomics

ISSN: 1471-2164

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