Table 1 Genome features of the 24 analyzed M. aeruginosa strains
From: Comparative genomics analysis of c-di-GMP metabolism and regulation in Microcystis aeruginosa
Strains | Isolation Location | NCBI Accession Number (Genome/Plasmid) | NCBI Assembly Number | Contigs | Genome Size (Mbs) | G + C % | CDs | Completeness (%) | Contamination (%) |
|---|---|---|---|---|---|---|---|---|---|
CHAOHU 1326 | Chaohu Lake, CN | MOLZ00000000/− | GCA_001895325.1 | 617 | 5.27158 | 42.50 | 4590 | 99.67 | 1.39 |
DIANCHI905 | Dianchi Lake, CN | AOCI00000000/− | GCA_000332585.1 | 335 | 4.85887 | 42.50 | 4303 | 99.01 | 2.92 |
KW | Wangsong Reservoir, KR | MVGR00000000/− | GCA_002025445.1 | 6 | 5.88943 | 42.80 | 4854 | 97.92 | 0.51 |
NaRes975 | Nanwan Reservoir, CN | MOLN00000000/− | GCA_001885655.1 | 413 | 5.11753 | 42.40 | 4617 | 99.89 | 0.51 |
NIES44 | Lake kasumigaura, JP | BBPA00000000/− | GCA_000787675.1 | 79 | 4.56532 | 43.20 | 4053 | 99.89 | 0.07 |
NIES87 | Lake kasumigaura, JP | BFAC00000000/− | GCA_002933835.1 | 246 | 4.92578 | 42.90 | 4214 | 99.89 | 0.84 |
NIES88 | Lake Kawaguchi Yamanashi, JP | JXYX00000000/− | GCA_001578075.1 | 262 | 5.26322 | 43.00 | 4620 | 99.45 | 0.84 |
NIES98 | Lake kasumigaura, JP | MDZH00000000/− | GCA_001725075.1 | 500 | 4.98253 | 42.40 | 4412 | 99.67 | 0.37 |
NIES843 | Lake kasumigaura, JP | AP009552/− | GCA_000010625.1 | 1 | 5.84279 | 42.30 | 5190 | 99.89 | 0.51 |
NIES1211 | Lake Tofutsu, JP | BEIV00000000/− | GCA_003206625.1 | 289 | 4.73839 | 42.80 | 4209 | 99.89 | 0.51 |
NIES2481 | Lake kasumigaura, JP | CP012375/CP025929 | GCA_001704955.2 | 2 | 4.44055 | 42.86 | 3966 | 99.82 | 0.15 |
NIES2549 | Lake kasumigaura, JP | CP011304/CP026286 | GCA_000981785.2 | 2 | 4.3012 | 42.90 | 3843 | 99.89 | 0.07 |
PCC7806SL | Braakman Reservoir, NL | CP020771/− | GCA_002095975.1 | 1 | 5.13934 | 42.10 | 4497 | 99.67 | 1.45 |
PCC7941 | Lake Lillte Rideau, CA | CAIK00000000/− | GCA_000312205.1 | 433 | 4.8019 | 42.60 | 4337 | 98.57 | 0.73 |
PCC9432 | Lake Lillte Rideau, CA | CAIH00000000/− | GCA_000307995.2 | 438 | 4.99494 | 42.50 | 4543 | 99.67 | 0.29 |
PCC9443 | Fishpond, CF | CAIJ00000000/− | GCA_000312185.1 | 760 | 5.18504 | 42.70 | 4545 | 98.36 | 0.37 |
PCC9701 | Guerlesquin dam, FR | CAIQ00000000/− | GCA_000312285.1 | 550 | 4.756 | 42.70 | 4312 | 99.12 | 0.07 |
PCC9717 | Rochereau dam, FR | CAII00000000/− | GCA_000312165.1 | 892 | 5.30034 | 42.70 | 4609 | 98.57 | 0.29 |
PCC9806 | Oskosh, US | CAIL00000000/− | GCA_000312725.1 | 310 | 4.26256 | 43.10 | 4258 | 99.01 | 0.18 |
PCC9807 | Hartbeespoort dam, ZA | CAIM00000000/− | GCA_000312225.1 | 782 | 5.15571 | 42.60 | 4588 | 99.01 | 0.91 |
PCC9808 | Malpas dam, AU | CAIN00000000/− | GCA_000312245.1 | 479 | 5.05105 | 42.40 | 4556 | 99.01 | 0.51 |
PCC9809 | Lake Michigan, US | CAIO00000000/− | GCA_000312265.1 | 809 | 5.01102 | 42.80 | 4497 | 98.36 | 0.95 |
Sj | Lake Shinji, JP | BDSG00000000/− | GCA_003206555.1 | 366 | 4.61732 | 42.80 | 3956 | 99.67 | 0.18 |
TAIHU98 | Taihu Lake, CN | ANKQ00000000/− | GCA_000330925.1 | 4 | 4.84961 | 42.50 | 4340 | 99.89 | 0.22 |