Table 2 Annotation of population-level SNV of each population
From: Insight into unique somitogenesis of yak (Bos grunniens) with one additional thoracic vertebra
Values | ZC | YC | GY |
|---|---|---|---|
splicing | 93 | 105 | 96 |
intronic | 228,602 | 239,609 | 228,036 |
intergenic | 668,240 | 694,364 | 655,789 |
UTR3 | 3488 | 3662 | 3411 |
UTR5 | 1050 | 1131 | 1071 |
ncRNA_exonic | 1230 | 1253 | 1168 |
ncRNA_splicing | 1 | 2 | 1 |
ncRNA_intronic | 2662 | 2628 | 2636 |
ncRNA_UTR5 | 2 | 3 | 3 |
upstream | 8342 | 9110 | 8458 |
downstream | 8360 | 8948 | 7798 |
upstream;downstream | 221 | 270 | 245 |
exonic | 13,084 | 14,769 | 13,097 |
exonic;splicing | 18 | 18 | 19 |
nonsynonymous SNV | 6451 | 7307 | 6526 |
synonymous SNV | 4723 | 5266 | 4712 |
stopgain SNV | 61 | 76 | 62 |
stoploss SNV | 14 | 12 | 13 |
unknown | 1853 | 2126 | 1803 |