Fig. 2
From: Forcing external constraints on tree inference using ASTRAL
Effectiveness of constrained ASTRAL with constraint trees that have randomly distributed missing leaves. ASTRAL-III species trees are compared with and without constraints using the Normalized RF distance between inferred species tree and true species tree. Boxplots show distribution (over 100 replicates) and triangles show the mean. Panels correspond to three different levels of ILS (500K, 1M and 2M generations, corresponding to very high, high, and moderate ILS, respectively) and varying number of genes (50, 200, and 1000). The constraint trees are obtained by pruning 50, 100, or 150 (x-axis) randomly chosen leaves from the unconstrained ASTRAL tree or the true species tree