Table 2 Dixon database Chromosome 1 information after applying HiC-Pack to MHiC at 500Kb and 1 Mb. In this table, the first row shows the number of interactions and average read counts before applying to MHiC. The GOTHiC and Fit-Hi-C rows show the number of significant interactions and its average read counts for each method
Methods | Interactions in 500Kb | Average read counts | Interactions in 1 Mb | Average read counts |
|---|---|---|---|---|
Raw | Total: 98912 | 11.73 | Total: 26302 | 40.49 |
GOTHiC | Significant: 5362 | 84.12 | Significant: 3027 | 153.49 |
Fit-Hi-C | Significant: 12351 | 76.91 | Significant: 7062 | 141.07 |