| lib | Raw reads | 3ADT&length filter | Junk reads | Rfam | mRNA | Repeats | valid reads | rRNA | tRNA | snoRNA | snRNA | other Rfam RNA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CK1 | Total | 13,774,024 | 3,390,537 | 38,220 | 1,054,000 | 847,233 | 4749 | 8,495,423 | 863,173 | 139,387 | 5115 | 1723 | 44,602 |
 | % of Total | 100.00 | 24.62 | 0.28 | 7.65 | 6.15 | 0.03 | 61.68 | 6.27 | 1.01 | 0.04 | 0.01 | 0.32 |
 | uniq | 2,453,175 | 841,448 | 20,791 | 18,859 | 14,165 | 185 | 1,558,672 | 15,033 | 2264 | 332 | 159 | 1071 |
 | % of uniq | 100.00 | 34.30 | 0.85 | 0.77 | 0.58 | 0.01 | 63.54 | 0.11 | 0.02 | 0.00 | 0.00 | 0.01 |
CK2 | Total | 13,852,706 | 2,934,133 | 33,314 | 1,258,384 | 973,925 | 6008 | 8,708,898 | 1,083,866 | 115,231 | 4395 | 1803 | 53,089 |
 | % of Total | 100.00 | 21.18 | 0.24 | 9.08 | 7.03 | 0.04 | 62.87 | 7.82 | 0.83 | 0.03 | 0.01 | 0.38 |
 | uniq | 2,405,519 | 874,287 | 17,335 | 19,294 | 14,955 | 214 | 1,480,435 | 15,747 | 1975 | 291 | 149 | 1132 |
 | % of uniq | 100.00 | 36.35 | 0.72 | 0.80 | 0.62 | 0.01 | 61.54 | 0.11 | 0.01 | 0.00 | 0.00 | 0.01 |
CK3 | Total | 11,305,213 | 751,727 | 31,484 | 861,890 | 947,345 | 4370 | 8,761,939 | 698,077 | 121,230 | 4076 | 1822 | 36,685 |
 | % of Total | 100.00 | 6.65 | 0.28 | 7.62 | 8.38 | 0.04 | 77.50 | 6.17 | 1.07 | 0.04 | 0.02 | 0.32 |
 | uniq | 2,072,418 | 519,795 | 17,449 | 18,638 | 13,555 | 182 | 1,503,706 | 14,936 | 2174 | 299 | 140 | 1089 |
 | % of uniq | 100.00 | 25.08 | 0.84 | 0.90 | 0.65 | 0.01 | 72.56 | 0.13 | 0.02 | 0.00 | 0.00 | 0.01 |
GLY1 | Total | 10,234,674 | 3,616,701 | 19,106 | 1,149,522 | 967,205 | 17,295 | 4,557,991 | 961,780 | 124,212 | 6855 | 2549 | 54,126 |
 | % of Total | 100.00 | 35.34 | 0.19 | 11.23 | 9.45 | 0.17 | 44.53 | 9.40 | 1.21 | 0.07 | 0.02 | 0.53 |
 | uniq | 1,828,494 | 917,707 | 7845 | 18,067 | 13,035 | 282 | 872,751 | 14,296 | 2195 | 320 | 142 | 1114 |
 | % of uniq | 100.00 | 50.19 | 0.43 | 0.99 | 0.71 | 0.02 | 47.73 | 0.14 | 0.02 | 0.00 | 0.00 | 0.01 |
GLY2 | Total | 14,038,269 | 7,373,691 | 39,460 | 857,843 | 617,980 | 1416 | 5,187,783 | 722,433 | 94,555 | 3929 | 2256 | 34,670 |
 | % of Total | 100.00 | 52.53 | 0.28 | 6.11 | 4.40 | 0.01 | 36.95 | 5.15 | 0.67 | 0.03 | 0.02 | 0.25 |
 | uniq | 2,749,254 | 1,226,291 | 25,154 | 14,288 | 11,708 | 77 | 1,472,281 | 11,735 | 1340 | 291 | 145 | 777 |
 | % of uniq | 100.00 | 44.60 | 0.91 | 0.52 | 0.43 | 0.00 | 53.55 | 0.08 | 0.01 | 0.00 | 0.00 | 0.01 |
GLY3 | Total | 9,915,965 | 5,677,422 | 8527 | 550,744 | 474,821 | 12,345 | 3,247,324 | 426,107 | 89,633 | 4243 | 1279 | 29,482 |
 | % of Total | 100.00 | 57.26 | 0.09 | 5.55 | 4.79 | 0.12 | 32.75 | 4.30 | 0.90 | 0.04 | 0.01 | 0.30 |
 | uniq | 1,472,793 | 870,393 | 4467 | 13,287 | 8952 | 246 | 576,405 | 10,643 | 1523 | 211 | 76 | 834 |
 | % of uniq | 100.00 | 59.10 | 0.30 | 0.90 | 0.61 | 0.02 | 39.14 | 0.11 | 0.02 | 0.00 | 0.00 | 0.01 |