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Table 2 Key DEGs that are involved in the resistance response to infection by RKNs and are enriched according to the trend analysis of 25 °C line (growing at a soil temperature of 25 °C)

From: Transcriptomic profiling of Solanum peruvianum LA3858 revealed a Mi-3-mediated hypersensitive response to Meloidogyne incognita

Gene IDSymbolCK-log2 (1)log2(HR0 vs. HR3)log2(HR0 vs. HR6)ProfilePathway
Solyc01g108190.3CML101.851.386Plant-pathogen interaction
Solyc02g037540.2At4g27220(RPS2)01.361.446Plant-pathogen interaction
Solyc02g081040.3CERK101.121.26Plant-pathogen interaction
Solyc02g083850.3CPK16(CDPK)01.381.586Plant-pathogen interaction
Solyc02g090810.3/(CML)01.220.696Plant-pathogen interaction
Solyc03g005660.3R1A(RPM1)00.91.216Plant-pathogen interaction
Solyc03g007250.1CNGC1010.76Plant-pathogen interaction
Solyc03g007260.3CNGC101.050.96Plant-pathogen interaction
Solyc03g007890.3HSP83A(HSP90)04.124.116Plant-pathogen interaction
Solyc03g026340.3CPK26(CDPK)01.221.086Plant-pathogen interaction
Solyc03g033540.3CPK16(CDPK)01.241.296Plant-pathogen interaction
Solyc03g044900.3CML4101.50.836Plant-pathogen interaction
Solyc03g098210.3CNGC2001.361.576Plant-pathogen interaction
Solyc04g007090.1R1A(RPM1)01.371.446Plant-pathogen interaction
Solyc04g081910.3CPK29(CDPK)01.040.656Plant-pathogen interaction
Solyc06g006020.2FLS201.181.556Plant-pathogen interaction
Solyc06g036290.3HSP83A(HSP90)05.445.186Plant-pathogen interaction
Solyc06g068680.3RBOHD01.210.86Plant-pathogen interaction
Solyc06g075550.3CDL1-like (PIK1)01.942.526Plant-pathogen interaction
Solyc07g047960.3WRKY101.411.526Plant-pathogen interaction
Solyc07g065840.2HSC80(HSP90)01.581.246Plant-pathogen interaction
Solyc08g076493.1CML1701.010.716Plant-pathogen interaction
Solyc09g007020.1PR104.034.836Plant-pathogen interaction
Solyc09g059430.3RIN400.831.096Plant-pathogen interaction
Solyc12g006170.2WRKY2001.371.246Plant-pathogen interaction
Solyc01g008980.3DPBF4(ABF)01.481.256Plant hormone signal transduction
Solyc01g095700.3PYL801.741.426Plant hormone signal transduction
Solyc01g096810.3EIN301.030.816Plant hormone signal transduction
Solyc01g098400.3AHP100.881.046Plant hormone signal transduction
Solyc01g102300.3PIF301.030.626Plant hormone signal transduction
Solyc01g104650.3GBF4(ABF)02.72.326Plant hormone signal transduction
Solyc01g107400.2GH3.101.461.026Plant hormone signal transduction
Solyc01g108087.1ABF401.871.966Plant hormone signal transduction
Solyc01g108280.3SRK2E01.381.236Plant hormone signal transduction
Solyc03g120390.3IAA1701.391.396Plant hormone signal transduction
Solyc03g121060.3IAA2601.180.96Plant hormone signal transduction
Solyc03g121880.3HAB1(PP2C)01.561.576Plant hormone signal transduction
Solyc04g012160.3SAPK201.51.396Plant hormone signal transduction
Solyc04g054320.3TGA1A00.821.046Plant hormone signal transduction
Solyc04g078840.3ABF202.692.516Plant hormone signal transduction
Solyc05g014260.3ARR1102.031.726Plant hormone signal transduction
Solyc05g015610.3AHK3(CRE1)01.2716Plant hormone signal transduction
Solyc05g052980.3PP2CA01.431.496Plant hormone signal transduction
Solyc06g061180.1PYR100.981.176Plant hormone signal transduction
Solyc06g072650.1SAUR7102.092.126Plant hormone signal transduction
Solyc06g074320.3TGA2101.130.76Plant hormone signal transduction
Solyc06g076400.3At2g29380(PP2C)02.162.536Plant hormone signal transduction
Solyc07g040990.3Os01g0583100(PP2C)01.311.366Plant hormone signal transduction
Solyc08g060810.3EBF101.251.176Plant hormone signal transduction
Solyc08g082180.3PYL900.981.256Plant hormone signal transduction
Solyc09g007020.1/(PR1)04.034.836Plant hormone signal transduction
Solyc10g009290.1BHLH14(MYC2)02.782.436Plant hormone signal transduction
Solyc10g018340.1SAUR3601.291.76Plant hormone signal transduction
Solyc10g078670.2/(TGA)01.811.136Plant hormone signal transduction
Solyc12g044870.1EIN4(ETR)03.21.746Plant hormone signal transduction
Solyc12g056860.2TGA701.261.196Plant hormone signal transduction