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Fig. 1 | BMC Genomics

Fig. 1

From: De novo assembly of the olive fruit fly (Bactrocera oleae) genome with linked-reads and long-read technologies minimizes gaps and provides exceptional Y chromosome assembly

Fig. 1

Schematic of the method used to generate the different assemblies. DNA extracted from adult female and/or male insects was used to generate sequencing libraries for; Illumina paired-end (PE, 64X and 6X coverage, respectively), mate-pair (MP, 100X coverage), 10x Genomics linked-reads (100X coverage generated but 74X was found optimal for genome assembly), Pacific Biosciences (PacBio, 20X coverage), and Oxford Nanopore Technologies (ONT, 28X coverage). Independently generated assemblies are shown, and assemblies generated from scaffolding and gap scaffolding are shown with their GenBank accession numbers. Arrows indicate the final resulting assemblies while arrow heads indicate the samples or datasets used to generate the final assemblies

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BMC Genomics

ISSN: 1471-2164

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