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Table 2 Top 20 significant genes in the CON and PRO group sorted on level of significance (F-test q-value< 0.0001) in the CON (A) and PRO (B) group. Q-values for CON and PRO group as well as the interaction effect of endurance exercise training with protein supplementation are adjusted IMBT p-values. FC is the signed fold change. CON is the change in the control group. PRO is the change in the protein group. Inter is the interaction effect between protein supplementation and endurance training

From: Impact of protein supplementation during endurance training on changes in skeletal muscle transcriptome

(A). Gene

FC CON

FC PRO

Q-val. CON

Q-val. PRO

P-val. Inter

Q-val. Inter

LAMA4

1.39

1.57

0.000

0.000

0.051

0.821

COL4A1

1.69

1.87

0.000

0.000

0.311

0.933

A2M

1.22

1.33

0.000

0.000

0.029

0.796

MYO1B

1.37

1.44

0.000

0.000

0.476

0.957

CD34

1.28

1.33

0.000

0.000

0.496

0.958

NFIX

−1.12

−1.09

0.000

0.001

0.288

0.926

THBS4

1.61

1.94

0.000

0.000

0.081

0.853

COL4A2

1.54

1.77

0.000

0.000

0.144

0.881

RYR3

1.42

1.12

0.000

0.336

0.003

0.647

FXYD1

−1.15

−1.13

0.000

0.000

0.612

0.974

COX4I1

1.19

1.15

0.000

0.001

0.441

0.952

TMEM159

−1.41

−1.23

0.000

0.026

0.083

0.854

SMTNL1

−1.55

− 1.39

0.000

0.003

0.298

0.929

LAMB1

1.46

1.79

0.000

0.000

0.025

0.782

ALDH1B1

1.35

1.25

0.000

0.005

0.254

0.916

RHOJ

1.32

1.15

0.000

0.090

0.035

0.799

SMOC2

1.31

1.37

0.000

0.000

0.482

0.958

LXN

1.41

1.28

0.000

0.007

0.254

0.916

ANKRD29

1.42

1.16

0.000

0.198

0.020

0.756

DECR1

1.19

1.17

0.000

0.000

0.767

0.989

(B). Gene

FC PRO

FC CON

Q-val. CON

Q-val. PRO

P-val. Inter

Q-val. Inter

LAMA4

1.57

1.39

0.000

0.000

0.051

0.821

A2M

1.33

1.22

0.000

0.000

0.029

0.796

LAMB1

1.79

1.46

0.000

0.000

0.025

0.782

COL4A1

1.87

1.69

0.000

0.000

0.311

0.933

THBS4

1.94

1.61

0.000

0.000

0.081

0.853

COL4A2

1.77

1.54

0.000

0.000

0.144

0.881

MYO1B

1.44

1.37

0.000

0.000

0.476

0.957

NID1

1.48

1.26

0.002

0.000

0.022

0.756

CD34

1.33

1.28

0.000

0.000

0.496

0.958

SPARC

1.45

1.29

0.000

0.000

0.075

0.848

COL15A1

1.43

1.25

0.001

0.000

0.045

0.816

UTRN

1.22

1.12

0.003

0.000

0.029

0.796

EDNRB

1.70

1.34

0.005

0.000

0.016

0.756

PXDN

1.75

1.48

0.000

0.000

0.107

0.863

ETS1

1.43

1.26

0.001

0.000

0.063

0.839

MXRA5

2.51

1.90

0.000

0.000

0.110

0.863

COL3A1

2.06

1.70

0.000

0.000

0.178

0.893

IGFBP7

1.35

1.26

0.000

0.000

0.233

0.914

ANXA5

1.35

1.10

0.268

0.000

0.001

0.558

CAPN6

1.83

1.46

0.003

0.000

0.060

0.836