Table 3 MLST and cgMLST profiles of strains
From: Comparative genomics of whole-cell pertussis vaccine strains from India
Feature | Strain | adk | FumC | glyA | TyrB | Icd | pepA | Pgm | ST | cg-MLST |
|---|---|---|---|---|---|---|---|---|---|---|
Vaccine strains | J445 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 2 | 413 |
J446 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 410 | |
J447 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 2 | 411 | |
J448 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 2 | 412 | |
BP 165 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 2 | 41 | |
Clinical isolates | BPD1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 2 | 362 |
BPD2 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 2 | 362 |